How to run a model with PCSE

To get familiar with WOFOST models and how to run the models, we recommend to first check out the PCSE documentation and explore the notebooks 01 Getting Started with PCSE.ipynb and 02 Running with custom input data.ipynb .

In a nutshell, we can run a model, for example, leaf_dynamics using diffWOFOST as:

from diffwofost.physical_models.utils import EngineTestHelper

# create the model
model = EngineTestHelper(
    crop_parameters_provider,  # this provides the crop parameters
    weather_data_provider,
    agromanagement_provider,
    leaf_dynamics_config_file,  # this where the differentiable model is specified
    external_states,  # any external states if needed
)

# run the simulation with a fixed time step of one day
model.run_till_terminate()

# get the output
results = model.get_output()